alndist

Calculate sequence distance / similarity for aligned sequences.

install

Install devtools if you haven’t, by install.packages("devtools"). Then, install this package by devtools::install_github("Yue-Jiang/alndist"). Optionally, install the package, also install dependencies and build vignettes devtools::install_github("Yue-Jiang/alndist", dependencies = TRUE, build_vignettes = TRUE).